Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.06□□□□□ -0.48
Shisa8J3QNX5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Shisa8J3QNX5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm28630-201ENSMUST00000187806 498 ntBASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm5264-201ENSMUST00000190584 848 ntBASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm45841-201ENSMUST00000207700 164 ntBASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Shisa8J3QNX5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Mir874-201ENSMUST00000104769 76 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Gm46209-201ENSMUST00000217912 553 ntBASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shisa8J3QNX5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.03□□□□□ -0.48
Shisa8J3QNX5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shisa8J3QNX5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms