Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm12566-201ENSMUST00000121479 359 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm8546-201ENSMUST00000178288 1264 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Gm18393-201ENSMUST00000208349 1131 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 AC163667.3-201ENSMUST00000225774 222 ntBASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc180J3QNE4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Gm6992-201ENSMUST00000217973 1607 ntBASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Gm19187-201ENSMUST00000206781 892 ntBASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc180J3QNE4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Gm37666-201ENSMUST00000194110 866 ntBASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc180J3QNE4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 AC138604.1-201ENSMUST00000226969 739 ntBASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc180J3QNE4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Gm6963-201ENSMUST00000147879 379 ntBASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Gm22334-201ENSMUST00000158070 133 ntBASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ccdc180J3QNE4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC23.67■■□□□ 1.38
Ccdc180J3QNE4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms