Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gm37935-201ENSMUST00000192012 982 ntBASIC13.57□□□□□ -0.24
Trim55G3X8Y1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim55G3X8Y1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm45747-201ENSMUST00000212203 999 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm18246-201ENSMUST00000221023 728 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.56□□□□□ -0.24
Trim55G3X8Y1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim55G3X8Y1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm11780-201ENSMUST00000136880 516 ntBASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm7787-201ENSMUST00000216858 688 ntBASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms