Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb9E9Q5G2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Gm27514-201ENSMUST00000183692 110 ntBASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb9E9Q5G2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Gm12957-201ENSMUST00000117835 377 ntBASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Snora73a-201ENSMUST00000082453 205 ntBASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb9E9Q5G2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb9E9Q5G2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb9E9Q5G2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb9E9Q5G2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms