Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm13786-201ENSMUST00000122371 333 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm6458-201ENSMUST00000211573 635 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm27572-201ENSMUST00000183702 255 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Chd3B1AR17 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.92□□□□□ -0.34
Chd3B1AR17 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.92□□□□□ -0.34
Chd3B1AR17 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm12363-201ENSMUST00000122250 668 ntBASIC12.92□□□□□ -0.34
Chd3B1AR17 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.92□□□□□ -0.34
Chd3B1AR17 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.92□□□□□ -0.34
Chd3B1AR17 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chd3B1AR17 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms