Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm5640A3KG49 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm5640A3KG49 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gm5640A3KG49 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gm5640A3KG49 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Gm5640A3KG49 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gm5640A3KG49 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 AW822252-206ENSMUST00000208904 237 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm18049-201ENSMUST00000208909 581 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Gm5640A3KG49 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.39□□□□□ -0.27
Gm5640A3KG49 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm5640A3KG49 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.38□□□□□ -0.27
Gm5640A3KG49 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.38□□□□□ -0.27
Gm5640A3KG49 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gm5640A3KG49 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gm5640A3KG49 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms