Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Chd6A3KFM7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.6□□□□□ -0.71
Chd6A3KFM7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Chd6A3KFM7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm14234-201ENSMUST00000119539 845 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm1848-201ENSMUST00000120711 789 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm12403-201ENSMUST00000121384 959 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm3329-201ENSMUST00000159873 556 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm20414-201ENSMUST00000172918 646 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm28071-201ENSMUST00000190355 478 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm45481-201ENSMUST00000209717 877 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.59□□□□□ -0.71
Chd6A3KFM7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Chd6A3KFM7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Chd6A3KFM7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm14585-201ENSMUST00000120713 634 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm18059-201ENSMUST00000208073 580 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.58□□□□□ -0.72
Chd6A3KFM7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.58□□□□□ -0.72
Chd6A3KFM7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms