Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm5354-201ENSMUST00000182417 973 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mir6977-201ENSMUST00000184960 64 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm29608-201ENSMUST00000190444 463 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.63□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm2423-201ENSMUST00000074863 733 ntBASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm24447-201ENSMUST00000083977 338 ntBASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms