Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav5-4A0A075B652 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm27772-201ENSMUST00000184900 187 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm18041-201ENSMUST00000218210 618 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.11□□□□□ -0.63
Trav5-4A0A075B652 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm27989-201ENSMUST00000184721 107 ntBASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav5-4A0A075B652 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms