Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.84□□□□□ -0.03
AmfrQ9R049 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gm18307-201ENSMUST00000206864 949 ntBASIC14.84□□□□□ -0.03
AmfrQ9R049 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.84□□□□□ -0.03
AmfrQ9R049 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.84□□□□□ -0.03
AmfrQ9R049 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.84□□□□□ -0.03
AmfrQ9R049 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AmfrQ9R049 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AmfrQ9R049 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.83□□□□□ -0.04
AmfrQ9R049 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.83□□□□□ -0.04
AmfrQ9R049 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.83□□□□□ -0.04
AmfrQ9R049 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.04
AmfrQ9R049 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.83□□□□□ -0.04
AmfrQ9R049 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AmfrQ9R049 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AmfrQ9R049 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm15770-201ENSMUST00000117498 584 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm28911-201ENSMUST00000188837 117 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.82□□□□□ -0.04
AmfrQ9R049 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.82□□□□□ -0.04
AmfrQ9R049 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.82□□□□□ -0.04
AmfrQ9R049 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AmfrQ9R049 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.81□□□□□ -0.04
AmfrQ9R049 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AmfrQ9R049 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms