Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Lima1Q9ERG0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm12585-201ENSMUST00000117307 290 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm15393-201ENSMUST00000120499 219 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lima1Q9ERG0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lima1Q9ERG0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lima1Q9ERG0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.08□□□□□ -0.31
Lima1Q9ERG0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lima1Q9ERG0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lima1Q9ERG0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.08□□□□□ -0.31
Lima1Q9ERG0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Mir6956-201ENSMUST00000183598 62 ntBASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Gm27306-201ENSMUST00000183970 107 ntBASIC13.08□□□□□ -0.32
Lima1Q9ERG0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lima1Q9ERG0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Gm4804-201ENSMUST00000182234 999 ntBASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Gm10766-202ENSMUST00000194123 606 ntBASIC13.07□□□□□ -0.32
Lima1Q9ERG0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms