Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Gm15370-201ENSMUST00000117158 253 ntBASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18.06■□□□□ 0.48
Cpsf1Q9EPU4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Daam2-202ENSMUST00000224595 1926 ntBASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Gm45546-201ENSMUST00000211053 2394 ntBASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cpsf1Q9EPU4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm9004-201ENSMUST00000218739 1222 ntBASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm7789-202ENSMUST00000211273 1400 ntBASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Gm38346-201ENSMUST00000192379 2639 ntBASIC18.04■□□□□ 0.48
Cpsf1Q9EPU4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Gm13736-201ENSMUST00000119272 253 ntBASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf1Q9EPU4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf1Q9EPU4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms