Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmgn3Q9DCB1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Gm12260-201ENSMUST00000122447 411 ntBASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Gm18737-201ENSMUST00000173594 937 ntBASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Mir3113-201ENSMUST00000175478 76 ntBASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmgn3Q9DCB1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm19931-201ENSMUST00000198920 368 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hmgn3Q9DCB1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.4□□□□□ -0.42
Hmgn3Q9DCB1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms