Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chmp5Q9D7S9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gm27618-201ENSMUST00000183671 60 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gm27680-201ENSMUST00000184192 160 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chmp5Q9D7S9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp5Q9D7S9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Gm43514-201ENSMUST00000198852 424 ntBASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms