Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm8652-201ENSMUST00000181363 964 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm27486-201ENSMUST00000184923 80 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm16372-201ENSMUST00000073088 450 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tmem54Q9D7S1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Proscos-202ENSMUST00000178990 666 ntBASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Gm27839-201ENSMUST00000184242 106 ntBASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Gm44069-201ENSMUST00000204898 506 ntBASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Tmem54Q9D7S1 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.59□□□□□ -0.55
Tmem54Q9D7S1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tmem54Q9D7S1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tmem54Q9D7S1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tmem54Q9D7S1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tmem54Q9D7S1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms