Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim42Q9D2H5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Gm17271-201ENSMUST00000165535 355 ntBASIC13.27□□□□□ -0.29
Trim42Q9D2H5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim42Q9D2H5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm43514-201ENSMUST00000198852 424 ntBASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm18049-201ENSMUST00000208909 581 ntBASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim42Q9D2H5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Gm43930-201ENSMUST00000203868 845 ntBASIC13.25□□□□□ -0.29
Trim42Q9D2H5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms