Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Smurf1Q9CUN6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm5312-201ENSMUST00000203728 547 ntBASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smurf1Q9CUN6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm11434-201ENSMUST00000122379 629 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm24158-201ENSMUST00000175263 71 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Mir6990-201ENSMUST00000183724 91 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm27430-201ENSMUST00000184585 107 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm29310-201ENSMUST00000185468 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21825-201ENSMUST00000185728 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm29109-201ENSMUST00000185895 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21896-201ENSMUST00000186520 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21873-201ENSMUST00000186728 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21794-201ENSMUST00000187056 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21880-201ENSMUST00000187275 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21826-201ENSMUST00000187451 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21198-201ENSMUST00000188393 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21749-201ENSMUST00000189343 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21901-201ENSMUST00000189568 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm29424-201ENSMUST00000189716 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm28599-201ENSMUST00000189838 694 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21867-201ENSMUST00000189917 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm29269-201ENSMUST00000190087 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21722-201ENSMUST00000190153 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm28423-201ENSMUST00000190701 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21899-201ENSMUST00000190745 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21910-201ENSMUST00000191163 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21849-201ENSMUST00000191571 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm28678-201ENSMUST00000191593 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm20910-201ENSMUST00000193268 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 Gm21871-201ENSMUST00000194621 696 ntBASIC12.03□□□□□ -0.48
Smurf1Q9CUN6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms