Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm23200-201ENSMUST00000104379 132 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm22121-201ENSMUST00000175148 54 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm45118-201ENSMUST00000208928 825 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cldnd1Q9CQX5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cldnd1Q9CQX5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms