Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm14350-201ENSMUST00000116642 640 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm11222-201ENSMUST00000119005 738 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm11964-201ENSMUST00000120982 444 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Morn2-202ENSMUST00000227729 656 ntBASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.25□□□□□ -0.29
Cstf1Q99LC2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm14263-201ENSMUST00000117955 746 ntBASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm3890-201ENSMUST00000182416 207 ntBASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gm42997-202ENSMUST00000200321 985 ntBASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Cstf1Q99LC2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cstf1Q99LC2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms