Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm15240-201ENSMUST00000118156 720 ntBASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Mir497b-201ENSMUST00000093601 125 ntBASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vmp1Q99KU0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm5279-201ENSMUST00000199575 745 ntBASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vmp1Q99KU0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Mir698-201ENSMUST00000102164 109 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Gm37917-201ENSMUST00000194711 392 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.79□□□□□ -0.36
Vmp1Q99KU0 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.79□□□□□ -0.36
Vmp1Q99KU0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms