Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.35□□□□□ -0.27
Cdk9Q99J95 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdk9Q99J95 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.34□□□□□ -0.27
Cdk9Q99J95 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.34□□□□□ -0.27
Cdk9Q99J95 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.34□□□□□ -0.27
Cdk9Q99J95 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdk9Q99J95 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk9Q99J95 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk9Q99J95 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk9Q99J95 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdk9Q99J95 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cdk9Q99J95 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.33□□□□□ -0.28
Cdk9Q99J95 Gm13015-201ENSMUST00000118674 204 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms