Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col20a1Q923P0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Gm7809-201ENSMUST00000153199 742 ntBASIC15.59■□□□□ 0.09
Col20a1Q923P0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.59■□□□□ 0.09
Col20a1Q923P0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col20a1Q923P0 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.59■□□□□ 0.09
Col20a1Q923P0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col20a1Q923P0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col20a1Q923P0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col20a1Q923P0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.58■□□□□ 0.09
Col20a1Q923P0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col20a1Q923P0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Gm17208-201ENSMUST00000168388 535 ntBASIC15.58■□□□□ 0.08
Col20a1Q923P0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Gm38266-201ENSMUST00000194931 421 ntBASIC15.58■□□□□ 0.08
Col20a1Q923P0 Olfr284-202ENSMUST00000206647 966 ntBASIC15.58■□□□□ 0.08
Col20a1Q923P0 Gm45930-201ENSMUST00000221330 292 ntBASIC15.58■□□□□ 0.08
Col20a1Q923P0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col20a1Q923P0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm6023-201ENSMUST00000118217 606 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm3890-201ENSMUST00000182416 207 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Mir8109-201ENSMUST00000184375 117 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.57■□□□□ 0.08
Col20a1Q923P0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col20a1Q923P0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms