Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm15429-201ENSMUST00000151268 798 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm38144-201ENSMUST00000192790 465 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm5356-201ENSMUST00000093326 615 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhga4Q91XY4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm44397-201ENSMUST00000195950 113 ntBASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm18187-201ENSMUST00000196476 984 ntBASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm6983-201ENSMUST00000214912 628 ntBASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pcdhga4Q91XY4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhga4Q91XY4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms