Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trex1Q91XB0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trex1Q91XB0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm12502-201ENSMUST00000120197 444 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trex1Q91XB0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trex1Q91XB0 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.11■□□□□ 0.01
Trex1Q91XB0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trex1Q91XB0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.1■□□□□ 0.01
Trex1Q91XB0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.1■□□□□ 0.01
Trex1Q91XB0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trex1Q91XB0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Gm11964-201ENSMUST00000120982 444 ntBASIC15.09■□□□□ 0.01
Trex1Q91XB0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.09■□□□□ 0.01
Trex1Q91XB0 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.09■□□□□ 0.01
Trex1Q91XB0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.09■□□□□ 0.01
Trex1Q91XB0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.09■□□□□ 0.01
Trex1Q91XB0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trex1Q91XB0 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms