Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Gm43771-201ENSMUST00000202931 1578 ntBASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pcdhb17Q91VD8 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm37241-201ENSMUST00000191736 523 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm37599-201ENSMUST00000193067 489 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm18624-201ENSMUST00000220966 658 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm24447-201ENSMUST00000083977 338 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm17415-201ENSMUST00000096427 789 ntBASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb17Q91VD8 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm12341-201ENSMUST00000119724 503 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm12998-201ENSMUST00000122445 789 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm25971-201ENSMUST00000158953 286 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm3489-201ENSMUST00000190083 528 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm45668-201ENSMUST00000211271 493 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm19174-201ENSMUST00000216944 956 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhb17Q91VD8 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb17Q91VD8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdhb17Q91VD8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Pcdhb17Q91VD8 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.14□□□□□ -0.15
Pcdhb17Q91VD8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb17Q91VD8 Gm4806-201ENSMUST00000222704 1690 ntBASIC14.14□□□□□ -0.15
Pcdhb17Q91VD8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms