Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim60Q8VI40 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.72□□□□□ -0.21
Trim60Q8VI40 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.72□□□□□ -0.21
Trim60Q8VI40 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim60Q8VI40 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Gm10576-201ENSMUST00000191927 825 ntBASIC13.71□□□□□ -0.21
Trim60Q8VI40 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim60Q8VI40 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trim60Q8VI40 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim60Q8VI40 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.7□□□□□ -0.22
Trim60Q8VI40 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gm13223-201ENSMUST00000118609 747 ntBASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gm13616-201ENSMUST00000120600 222 ntBASIC13.7□□□□□ -0.22
Trim60Q8VI40 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim60Q8VI40 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.7□□□□□ -0.22
Trim60Q8VI40 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim60Q8VI40 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms