Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm15393-201ENSMUST00000120499 219 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm4804-201ENSMUST00000182234 999 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.9□□□□□ -0.34
Vps4aQ8VEJ9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Vps4aQ8VEJ9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vps4aQ8VEJ9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Gm13385-201ENSMUST00000121089 220 ntBASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps4aQ8VEJ9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms