Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Gm29667-201ENSMUST00000190817 490 ntBASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf8Q8VC56 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm7488-201ENSMUST00000117148 684 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm16215-201ENSMUST00000161990 637 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm28631-201ENSMUST00000190740 334 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rnf8Q8VC56 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm6912-201ENSMUST00000117218 544 ntBASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm21854-201ENSMUST00000179901 471 ntBASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm7063-201ENSMUST00000186840 981 ntBASIC12.79□□□□□ -0.36
Rnf8Q8VC56 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf8Q8VC56 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms