Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Gm17794-201ENSMUST00000220252 955 ntBASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpap2Q8VC34 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Gm11978-201ENSMUST00000122315 466 ntBASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Mir1894-201ENSMUST00000122802 81 ntBASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Gm27892-201ENSMUST00000185017 106 ntBASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.52□□□□□ -0.09
Rpap2Q8VC34 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpap2Q8VC34 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm16202-201ENSMUST00000117532 544 ntBASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.51□□□□□ -0.09
Rpap2Q8VC34 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpap2Q8VC34 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms