Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfc3Q8R323 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.29□□□□□ -0.44
Rfc3Q8R323 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Rfc3Q8R323 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rfc3Q8R323 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm29608-201ENSMUST00000190444 463 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm38223-201ENSMUST00000194484 695 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm42550-201ENSMUST00000201553 960 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm7287-201ENSMUST00000205267 602 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.28□□□□□ -0.44
Rfc3Q8R323 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rfc3Q8R323 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rfc3Q8R323 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms