Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubqln1Q8R317 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gm13689-201ENSMUST00000119360 685 ntBASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gm18018-201ENSMUST00000198273 408 ntBASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gm7653-201ENSMUST00000214567 508 ntBASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Gm6983-201ENSMUST00000214912 628 ntBASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubqln1Q8R317 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm44397-201ENSMUST00000195950 113 ntBASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubqln1Q8R317 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms