Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gm12502-201ENSMUST00000120197 444 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp7Q8R1T1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm13316-201ENSMUST00000140537 691 ntBASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm16570-201ENSMUST00000161951 436 ntBASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm37466-201ENSMUST00000195692 652 ntBASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp7Q8R1T1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Mir433-201ENSMUST00000093564 124 ntBASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp7Q8R1T1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms