Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm14350-201ENSMUST00000116642 640 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Gm7287-201ENSMUST00000205267 602 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.05□□□□□ -0.32
Treml1Q8K558 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.05□□□□□ -0.32
Treml1Q8K558 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.05□□□□□ -0.32
Treml1Q8K558 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Treml1Q8K558 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.04□□□□□ -0.32
Treml1Q8K558 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.04□□□□□ -0.32
Treml1Q8K558 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Treml1Q8K558 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Treml1Q8K558 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Treml1Q8K558 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.03□□□□□ -0.32
Treml1Q8K558 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Treml1Q8K558 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.03□□□□□ -0.32
Treml1Q8K558 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms