Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Gm28631-201ENSMUST00000190740 334 ntBASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vcpip1Q8CDG3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm5161-201ENSMUST00000075243 853 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vcpip1Q8CDG3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vcpip1Q8CDG3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vcpip1Q8CDG3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms