Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim9Q8C7M3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gm11978-201ENSMUST00000122315 466 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gm23984-201ENSMUST00000157139 203 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim9Q8C7M3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim9Q8C7M3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trim9Q8C7M3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms