Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm15770-201ENSMUST00000117498 584 ntBASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm15393-201ENSMUST00000120499 219 ntBASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps9d1Q8C190 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gm4804-201ENSMUST00000182234 999 ntBASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Mir7684-201ENSMUST00000183858 60 ntBASIC12.42□□□□□ -0.42
Vps9d1Q8C190 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps9d1Q8C190 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Gm15678-201ENSMUST00000117573 960 ntBASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps9d1Q8C190 Gm5866-201ENSMUST00000177881 973 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms