Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trerf1Q8BXJ2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gm24420-201ENSMUST00000176676 59 ntBASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Gm18905-201ENSMUST00000205454 928 ntBASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trerf1Q8BXJ2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trerf1Q8BXJ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trerf1Q8BXJ2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms