Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm37028-201ENSMUST00000194276 107 ntBASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm45550-201ENSMUST00000209380 946 ntBASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smg1Q8BKX6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm23949-201ENSMUST00000104027 127 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm45527-201ENSMUST00000211052 774 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm6447-201ENSMUST00000118905 835 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm29615-201ENSMUST00000185371 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28224-201ENSMUST00000186078 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm29001-201ENSMUST00000186177 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28292-201ENSMUST00000186593 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28101-201ENSMUST00000187608 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm29076-201ENSMUST00000187689 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28302-201ENSMUST00000187931 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28646-201ENSMUST00000188220 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28205-201ENSMUST00000189177 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm29032-201ENSMUST00000189797 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm28695-201ENSMUST00000190300 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm37448-201ENSMUST00000192795 697 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Smg1Q8BKX6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms