Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ubp1Q811S7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm5745-201ENSMUST00000183748 313 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.09□□□□□ -0.31
Ubp1Q811S7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ubp1Q811S7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ubp1Q811S7 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.08□□□□□ -0.31
Ubp1Q811S7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Ubp1Q811S7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ubp1Q811S7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ubp1Q811S7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ubp1Q811S7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.08□□□□□ -0.32
Ubp1Q811S7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.08□□□□□ -0.32
Ubp1Q811S7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.08□□□□□ -0.32
Ubp1Q811S7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ubp1Q811S7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms