Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm16397-201ENSMUST00000122201 494 ntBASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm34023-201ENSMUST00000195539 217 ntBASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnrc18Q80WC3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnrc18Q80WC3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnrc18Q80WC3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Mir339-201ENSMUST00000083659 96 ntBASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnrc18Q80WC3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnrc18Q80WC3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms