Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Prpf40bQ80W14 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.29■□□□□ 0.04
Prpf40bQ80W14 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gm22902-201ENSMUST00000158488 302 ntBASIC15.29■□□□□ 0.04
Prpf40bQ80W14 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Nsd1-205ENSMUST00000224693 852 ntBASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Prpf40bQ80W14 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm24255-201ENSMUST00000104481 128 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm14381-201ENSMUST00000122105 414 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm6082-201ENSMUST00000215204 454 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.28■□□□□ 0.04
Prpf40bQ80W14 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Mir686-201ENSMUST00000102174 109 ntBASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Gm2991-201ENSMUST00000173338 480 ntBASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Gm2445-201ENSMUST00000182798 989 ntBASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf40bQ80W14 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Prpf40bQ80W14 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms