Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.32□□□□□ -0.28
Usp8Q80U87 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.32□□□□□ -0.28
Usp8Q80U87 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Usp8Q80U87 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.32□□□□□ -0.28
Usp8Q80U87 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Usp8Q80U87 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp8Q80U87 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.31□□□□□ -0.28
Usp8Q80U87 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.31□□□□□ -0.28
Usp8Q80U87 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.31□□□□□ -0.28
Usp8Q80U87 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.31□□□□□ -0.28
Usp8Q80U87 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp8Q80U87 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp8Q80U87 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.31□□□□□ -0.28
Usp8Q80U87 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp8Q80U87 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp8Q80U87 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.29□□□□□ -0.28
Usp8Q80U87 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp8Q80U87 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp8Q80U87 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp8Q80U87 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp8Q80U87 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp8Q80U87 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms