Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.28□□□□□ -0.44
Pif1Q80SX8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.28□□□□□ -0.44
Pif1Q80SX8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
Pif1Q80SX8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pif1Q80SX8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.27□□□□□ -0.44
Pif1Q80SX8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm27243-201ENSMUST00000183964 521 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.27□□□□□ -0.45
Pif1Q80SX8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pif1Q80SX8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Mir686-201ENSMUST00000102174 109 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm26927-201ENSMUST00000182385 965 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Gm10146-201ENSMUST00000072739 309 ntBASIC12.26□□□□□ -0.45
Pif1Q80SX8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pif1Q80SX8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms