Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm8927-201ENSMUST00000181978 981 ntBASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Shd-206ENSMUST00000225145 998 ntBASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Gm3222-201ENSMUST00000071282 990 ntBASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ctdp1Q7TSG2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ctdp1Q7TSG2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm27989-201ENSMUST00000184721 107 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ctdp1Q7TSG2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gm12428-201ENSMUST00000119844 727 ntBASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms