Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm8652-201ENSMUST00000181363 964 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf139Q7TMV1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm11978-201ENSMUST00000122315 466 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm27839-201ENSMUST00000184242 106 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm19931-201ENSMUST00000198920 368 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Gm10012-201ENSMUST00000078252 192 ntBASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf139Q7TMV1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm8213-201ENSMUST00000118191 441 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm11814-201ENSMUST00000119515 929 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm10156-201ENSMUST00000122364 462 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm8810-201ENSMUST00000172895 754 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm24196-201ENSMUST00000179161 110 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf139Q7TMV1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms