Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gm14219-201ENSMUST00000120414 288 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Mir6546-201ENSMUST00000184460 62 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Gm9463-201ENSMUST00000206707 601 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.16□□□□□ -0.62
Rif1Q6PR54 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Rif1Q6PR54 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm14274-201ENSMUST00000117182 615 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm15515-201ENSMUST00000117827 822 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm13296-201ENSMUST00000117854 997 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm11979-201ENSMUST00000119629 743 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm28388-201ENSMUST00000186262 437 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm4768-201ENSMUST00000206199 686 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.15□□□□□ -0.62
Rif1Q6PR54 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rif1Q6PR54 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Trav11n-201ENSMUST00000200113 343 ntBASIC11.15□□□□□ -0.63
Rif1Q6PR54 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.15□□□□□ -0.63
Rif1Q6PR54 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rif1Q6PR54 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rif1Q6PR54 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms