Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm18753-201ENSMUST00000201000 566 ntBASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd4Q6PDQ2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Rprl1-202ENSMUST00000198476 238 ntBASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd4Q6PDQ2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chd4Q6PDQ2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Gm12380-201ENSMUST00000119012 544 ntBASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Gm14017-201ENSMUST00000121934 386 ntBASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Gm43138-201ENSMUST00000199123 708 ntBASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chd4Q6PDQ2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms