Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Gm14921-201ENSMUST00000118643 908 ntBASIC15.66■□□□□ 0.1
Col11a2Q64739 Gm12501-201ENSMUST00000119163 529 ntBASIC15.66■□□□□ 0.1
Col11a2Q64739 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.66■□□□□ 0.1
Col11a2Q64739 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Gm9230-201ENSMUST00000188228 532 ntBASIC15.66■□□□□ 0.1
Col11a2Q64739 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col11a2Q64739 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col11a2Q64739 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm10076-201ENSMUST00000073238 384 ntBASIC15.65■□□□□ 0.1
Col11a2Q64739 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.65■□□□□ 0.1
Col11a2Q64739 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.65■□□□□ 0.1
Col11a2Q64739 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col11a2Q64739 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col11a2Q64739 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Col11a2Q64739 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm8199-201ENSMUST00000121323 823 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm11675-201ENSMUST00000121873 832 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Rmrp-201ENSMUST00000157463 271 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm21811-201ENSMUST00000096485 930 ntBASIC15.64■□□□□ 0.09
Col11a2Q64739 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col11a2Q64739 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col11a2Q64739 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a2Q64739 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col11a2Q64739 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a2Q64739 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col11a2Q64739 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col11a2Q64739 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Col11a2Q64739 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms