Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Gm14767-201ENSMUST00000121559 586 ntBASIC13.32□□□□□ -0.28
SnrpaQ62189 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.32□□□□□ -0.28
SnrpaQ62189 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SnrpaQ62189 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SnrpaQ62189 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.31□□□□□ -0.28
SnrpaQ62189 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.31□□□□□ -0.28
SnrpaQ62189 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm27618-201ENSMUST00000183671 60 ntBASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm2756-201ENSMUST00000195851 400 ntBASIC13.31□□□□□ -0.28
SnrpaQ62189 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SnrpaQ62189 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SnrpaQ62189 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SnrpaQ62189 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SnrpaQ62189 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SnrpaQ62189 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.3□□□□□ -0.28
SnrpaQ62189 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SnrpaQ62189 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.3□□□□□ -0.28
SnrpaQ62189 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.3□□□□□ -0.28
SnrpaQ62189 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms