Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rai1Q61818 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.61□□□□□ -0.39
Rai1Q61818 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rai1Q61818 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Rai1Q61818 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.61□□□□□ -0.39
Rai1Q61818 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.61□□□□□ -0.39
Rai1Q61818 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.61□□□□□ -0.39
Rai1Q61818 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rai1Q61818 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Rai1Q61818 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rai1Q61818 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
Rai1Q61818 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.6□□□□□ -0.39
Rai1Q61818 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.6□□□□□ -0.39
Rai1Q61818 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.6□□□□□ -0.39
Rai1Q61818 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rai1Q61818 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rai1Q61818 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rai1Q61818 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rai1Q61818 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rai1Q61818 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm12566-201ENSMUST00000121479 359 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm37986-201ENSMUST00000193285 383 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Gm44405-201ENSMUST00000198952 126 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.59□□□□□ -0.39
Rai1Q61818 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rai1Q61818 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rai1Q61818 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms